International Journal of Cheminformatics Review Article
Role of Carboxylesterases in Xenobiotic Metabolism and Detoxification: Insights for Cheminformatics Approaches
Abstract
Xenobiotics, which include a wide range of environmental pollutants, food additives, drugs, and carcinogens, are foreign chemical entities that enter the human body and may accumulate, leading to toxic effects. Phase I and phase II metabolic responses are among the detoxification procedures that are necessary to lessen these negative consequences. This review highlights the pivotal role of carboxylesterases (CES), enzymes involved in the hydrolysis of ester, amide, and thioester bonds in xenobiotics, in the metabolism and detoxification of these substances. We discuss the structural and functional properties of CES, their tissue distribution, and the implications of their activity in drug metabolism and environmental toxin clearance. In the context of cheminformatics, we explore how computational models can assist in predicting CES activity, understanding substrate specificity, and designing drug molecules or inhibitors that modulate CES activity. The information presented here provides valuable insights for both pharmacological applications and environmental health assessments.
Keywords
References (59)
- Joseph P. Transcriptomics in toxicology. Food and Chemical Toxicology. 2017;109:650-662. doi:10.1016/j.fct.2017.07.031
- Mansuy D. Le métabolisme des xénobiotiques : effets bénéfiques, effets néfastes. Biologie Aujourd'hui. 2013;207(1):33-37. doi:10.1051/jbio/2013003
- Patterson AD, Gonzalez FJ, Idle JR. Xenobiotic Metabolism: A View through the Metabolometer. Chemical Research in Toxicology. 2010;23(5):851-860. doi:10.1021/tx100020p
- Detoxification and Substance Abuse Treatment Treatment Improvement Protocol (TIP) Series. (2006). Rockville (MD).
- Kreitinger JM, Beamer CA, Shepherd DM. Environmental Immunology: Lessons Learned from Exposure to a Select Panel of Immunotoxicants. The Journal of Immunology. 2016;196(8):3217-3225. doi:10.4049/jimmunol.1502149
- Croom E. Metabolism of Xenobiotics of Human Environments. Progress in Molecular Biology and Translational Science. 2012:31-88. doi:10.1016/b978-0-12-415813-9.00003-9
- Godin SJ, Scollon EJ, Hughes MF, Potter PM, DeVito MJ, Ross MK. Species Differences in the in Vitro Metabolism of Deltamethrin and Esfenvalerate: Differential Oxidative and Hydrolytic Metabolism by Humans and Rats. Drug Metabolism and Disposition. 2006;34(10):1764-1771. doi:10.1124/dmd.106.010058
- The Role of Carboxylesterases in Therapeutic Intervention of Nerve Gases Poisoning Sigrun Hanne Sterri, Frode Fonnum, in Handbook of Toxicology of Chemical Warfare Agents. (2015).
- Yan, B. (2014). Carboxylesterases. In Encyclopedia of Toxicology (pp. 695–698). Elsevier.
- Bachmann, K. (2009). Drug Metabolism. In Pharmacology (pp. 131–173). Elsevier.
- Koppel N, Maini Rekdal V, Balskus EP. Chemical transformation of xenobiotics by the human gut microbiota. Science. 2017;356(6344). doi:10.1126/science.aag2770
- Abdelsalam NA, Ramadan AT, ElRakaiby MT, Aziz RK. Toxicomicrobiomics: The Human Microbiome vs. Pharmaceutical, Dietary, and Environmental Xenobiotics. Frontiers in Pharmacology. 2020;11. doi:10.3389/fphar.2020.00390
- Clarke G, Sandhu KV, Griffin BT, Dinan TG, Cryan JF, Hyland NP. Gut Reactions: Breaking Down Xenobiotic–Microbiome Interactions. Pharmacological Reviews. 2019;71(2):198-224. doi:10.1124/pr.118.015768
- Wang D, Zou L, Jin Q, Hou J, Ge G, Yang L. Human carboxylesterases: a comprehensive review. Acta Pharmaceutica Sinica B. 2018;8(5):699-712. doi:10.1016/j.apsb.2018.05.005
- Hatfield MJ, Umans RA, Hyatt JL, Edwards CC, Wierdl M, Tsurkan L, et al. Carboxylesterases: General detoxifying enzymes. Chemico-Biological Interactions. 2016;259:327-331. doi:10.1016/j.cbi.2016.02.011
- Sanghani SP, Sanghani PC, Schiel MA, Bosron WF. Human Carboxylesterases: An Update on CES1, CES2 and CES3. Protein & Peptide Letters. 2009;16(10):1207-1214. doi:10.2174/092986609789071324
- Satoh T, Hosokawa M. Structure, function and regulation of carboxylesterases. Chemico-Biological Interactions. 2006;162(3):195-211. doi:10.1016/j.cbi.2006.07.001
- Satoh T, Hosokawa M. THE MAMMALIAN CARBOXYLESTERASES: From Molecules to Functions. Annual Review of Pharmacology and Toxicology. 1998;38(1):257-288. doi:10.1146/annurev.pharmtox.38.1.257
- Ross MK, Crow JA. Human carboxylesterases and their role in xenobiotic and endobiotic metabolism. Journal of Biochemical and Molecular Toxicology. 2007;21(4):187-196. doi:10.1002/jbt.20178
- Hosokawa M. Structure and Catalytic Properties of Carboxylesterase Isozymes Involved in Metabolic Activation of Prodrugs. Molecules. 2008;13(2):412-431. doi:10.3390/molecules13020412
- Imai T. Human Carboxylesterase Isozymes: Catalytic Properties and Rational Drug Design. Drug Metabolism and Pharmacokinetics. 2006;21(3):173-185. doi:10.2133/dmpk.21.173
- Redinbo MR, Potter PM. Keynote review: Mammalian carboxylesterases: From drug targets to protein therapeutics. Drug Discovery Today. 2005;10(5):313-325. doi:10.1016/s1359-6446(05)03383-0
- Satoh T, Taylor P, Bosron WF, Sanghani SP, Hosokawa M, Du BNL. Current Progress on Esterases: From Molecular Structure to Function. Drug Metabolism and Disposition. 2002;30(5):488-493. doi:10.1124/dmd.30.5.488
- Potter P.M., Wolverton J.S., Morton C.L., Wierdl M., Danks M.K. Cellular localization domains of a rabbit and a human carboxylesterase: influence on irinotecan (CPT-11) metabolism by the rabbit enzyme. Cancer Res. 1998;58:3627–3632.
- Zhu HJ, Wang X, Gawronski BE, Brinda BJ, Angiolillo DJ, Markowitz JS. Carboxylesterase 1 as a Determinant of Clopidogrel Metabolism and Activation. The Journal of Pharmacology and Experimental Therapeutics. 2013;344(3):665-672. doi:10.1124/jpet.112.201640
- Zhu HJ, Markowitz JS. Activation of the Antiviral Prodrug Oseltamivir Is Impaired by Two Newly Identified Carboxylesterase 1 Variants. Drug Metabolism and Disposition. 2009;37(2):264-267. doi:10.1124/dmd.108.024943
- Nishi K, Huang H, Kamita SG, Kim IH, Morisseau C, Hammock BD. Characterization of pyrethroid hydrolysis by the human liver carboxylesterases hCE-1 and hCE-2. Archives of Biochemistry and Biophysics. 2006;445(1):115-123. doi:10.1016/j.abb.2005.11.005
- Imai T, Ohura K. The Role of Intestinal Carboxylesterase in the Oral Absorption of Prodrugs. Current Drug Metabolism. 2010;11(9):793-805. doi:10.2174/138920010794328904
- Lian J, Nelson R, Lehner R. Carboxylesterases in lipid metabolism: from mouse to human. Protein & Cell. 2017;9(2):178-195. doi:10.1007/s13238-017-0437-z
- Alam M, Ho S, Vance DE, Lehner R. Heterologous Expression, Purification, and Characterization of Human Triacylglycerol Hydrolase. Protein Expression and Purification. 2002;24(1):33-42. doi:10.1006/prep.2001.1553
- Ruby MA, Massart J, Hunerdosse DM, Schönke M, Correia JC, Louie SM, et al. Human Carboxylesterase 2 Reverses Obesity-Induced Diacylglycerol Accumulation and Glucose Intolerance. Cell Reports. 2017;18(3):636-646. doi:10.1016/j.celrep.2016.12.070
- Crow JA, Herring KL, Xie S, Borazjani A, Potter PM, Ross MK. Inhibition of carboxylesterase activity of THP1 monocytes/macrophages and recombinant human carboxylesterase 1 by oxysterols and fatty acids. Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids. 2010;1801(1):31-41. doi:10.1016/j.bbalip.2009.09.002
- Alam M, Vance DE, Lehner R. Structure−Function Analysis of Human Triacylglycerol Hydrolase by Site-Directed Mutagenesis: Identification of the Catalytic Triad and a Glycosylation Site. Biochemistry. 2002;41(21):6679-6687. doi:10.1021/bi0255625
- Wang DD, Zou LW, Jin Q, Hou J, Ge GB, Yang L. Recent progress in the discovery of natural inhibitors against human carboxylesterases. Fitoterapia. 2017;117:84-95. doi:10.1016/j.fitote.2017.01.010
- Dominguez E, Galmozzi A, Chang JW, Hsu KL, Pawlak J, Li W, et al. Integrated phenotypic and activity-based profiling links Ces3 to obesity and diabetes. Nature Chemical Biology. 2013;10(2):113-121. doi:10.1038/nchembio.1429
- Crow JA, Middleton BL, Borazjani A, Hatfield MJ, Potter PM, Ross MK. Inhibition of carboxylesterase 1 is associated with cholesteryl ester retention in human THP-1 monocyte/macrophages. Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids. 2008;1781(10):643-654. doi:10.1016/j.bbalip.2008.07.005
- Yoon K.J.P., Hyatt J.L., Morton C.L., Lee R.E., Potter P.M., Danks M.K. Characterization of inhibitors of specific carboxylesterases: development of carboxylesterase inhibitors for translational application. Mol Cancer Ther. 2004;3:903–909.
- Xu Y, Zhang C, He W, Liu D. Regulations of Xenobiotics and Endobiotics on Carboxylesterases: A Comprehensive Review. European Journal of Drug Metabolism and Pharmacokinetics. 2016;41(4):321-330. doi:10.1007/s13318-016-0326-5
- Hicks LD, Hyatt JL, Stoddard S, Tsurkan L, Edwards CC, Wadkins RM, et al. Improved, Selective, Human Intestinal Carboxylesterase Inhibitors Designed to Modulate 7-Ethyl-10-[4-(1-piperidino)-1-piperidino]carbonyloxycamptothecin (Irinotecan; CPT-11) Toxicity. Journal of Medicinal Chemistry. 2009;52(12):3742-3752. doi:10.1021/jm9001296
- Aranda J, Cerqueira NMFSA, Fernandes PA, Roca M, Tuñon I, Ramos MJ. The Catalytic Mechanism of Carboxylesterases: A Computational Study. Biochemistry. 2014;53(36):5820-5829. doi:10.1021/bi500934j
- Liebler DC, Guengerich FP. Elucidating mechanisms of drug-induced toxicity. Nature Reviews Drug Discovery. 2005;4(5):410-420. doi:10.1038/nrd1720
- Chambers JP, Hartgraves SL, Murphy MR, Wayner MJ, Kumar N, Valdes JJ. Effects of three reputed carboxylesterase inhibitors upon rat serum esterase activity. Neuroscience & Biobehavioral Reviews. 1991;15(1):85-88. doi:10.1016/s0149-7634(05)80096-x
- Cashman JR, Perotti BY, Berkman CE, Lin J. Pharmacokinetics and molecular detoxication. Environmental Health Perspectives. 1996;104(suppl1):23-40. doi:10.1289/ehp.96104s123
- Jones RD, Taylor AM, Tong EY, Repa JJ. Carboxylesterases Are Uniquely Expressed among Tissues and Regulated by Nuclear Hormone Receptors in the Mouse. Drug Metabolism and Disposition. 2013;41(1):40-49. doi:10.1124/dmd.112.048397
- Ross MK, Crow JA. Human carboxylesterases and their role in xenobiotic and endobiotic metabolism. Journal of Biochemical and Molecular Toxicology. 2007;21(4):187-196. doi:10.1002/jbt.20178
- Tsujita T, Okuda H. The Synthesis of Fatty Acid Ethyl Ester by Carboxylester Lipase. European Journal of Biochemistry. 1994;224(1):57-62. doi:10.1111/j.1432-1033.1994.tb19994.x
- Shibata Y, Takahashi H, Chiba M, Ishii Y. Prediction of Hepatic Clearance and Availability by Cryopreserved Human Hepatocytes: An Application of Serum Incubation Method. Drug Metabolism and Disposition. 2002;30(8):892-896. doi:10.1124/dmd.30.8.892
- Hodgson E, Levi PE. Pesticides: an important but underused model for the environmental health sciences. Environmental Health Perspectives. 1996;104(suppl1):97-106. doi:10.1289/ehp.96104s197
- Spitzen J, Koelewijn T, Mukabana WR, Takken W. Effect of insecticide-treated bed nets on house-entry by malaria mosquitoes: The flight response recorded in a semi-field study in Kenya. Acta Tropica. 2017;172:180-185. doi:10.1016/j.actatropica.2017.05.008
- Clark NWE, Scott RC, Blain PG, Williams FM. Fate of fluazifop butyl in rat and human skin in vitro. Archives of Toxicology. 1993;67(1):44-48. doi:10.1007/bf02072034
- Cantalamessa F. Acute toxicity of two pyrethroids, permethrin, and cypermethrin in neonatal and adult rats. Archives of Toxicology. 1993;67(7):510-513. doi:10.1007/bf01969923
- Casida JE, Ueda K, Gaughan LC, Jao LT, Soderlund DM. Structure-biodegradability relationships in pyrethroid insecticides. Archives of Environmental Contamination and Toxicology. 1975;3(4):491-500. doi:10.1007/bf02220819
- Brzezinski MR, Abraham TL, Stone CL, Dean RA, Bosron WF. Purification and characterization of a human liver cocaine carboxylesterase that catalyzes the production of benzoylecgonine and the formation of cocaethylene from alcohol and cocaine. Biochemical Pharmacology. 1994;48(9):1747-1755. doi:10.1016/0006-2952(94)90461-8
- Durrer A, Walther B, Racciatti A, Boss G, Testa B. Structure–Metabolism Relationships in the Hydrolysis of Nicotinate Esters by Rat Liver and Brain Subcellular Fractions. Pharmaceutical Research. 1991;8(7):832-839. doi:10.1023/a:1015839109449
- Inoue, M., Morikawa, M., Tsuboi, M., Ito, Y., & Sugiura, M. (1980). Comparative study of human intestinal and hepatic esterases as related to enzymatic properties and hydrolizing activity for ester-type drugs. The Japanese Journal of Pharmacology, 30(4), 529–535. doi:10.1254/jjp.30.529
- LUTTRELL WE, CASTLE MC. Species Differnces in the Hydrolysis of Meperdine and its Inhibition by Organophosphate Compounds. Toxicological Sciences. 1988;11(1):323-332. doi:10.1093/toxsci/11.1.323
- STOTT W. Hydrolysis of several glycol ether acetates and acrylate esters by nasal mucosal carboxylesterase in vitro. Fundamental and Applied Toxicology. 1985;5(2):399-404. doi:10.1016/0272-0590(85)90088-0
- Potter P, Wadkins R. Carboxylesterases - Detoxifying Enzymes and Targets for Drug Therapy. Current Medicinal Chemistry. 2006;13(9):1045-1054. doi:10.2174/092986706776360969
- Wikipedia contributors. (2024, July 7). Drug metabolism. Retrieved from Wikipedia, The Free Encyclopedia website: https://en.wikipedia.org/w/index.php?title=Drug_metabolism&oldid=1233160811