1 publication

• Published Subscription 15 Jul 2019

  Performance Analysis of DNA Sequencing Using Smith-Waterman Algorithm on FPGA

  By Anna Hakim, Anam Kashtwari, Rajinder Tiwari, Jamini Sharma

  Abstract: The Smith-Waterman algorithm is the most accurate and optimal alignment algorithm for DNA sequencing. It is utilized to locate the ideal local alignment between two sequences. While looking sequence databases that may contain billions of sequences, this algorithm turns out to be computationally costly and tedious. Smith-Waterman algorithm needs additional memory space and this constrains the extent of a sequence to be aligned. In this study we will implement the …

  Published in Journal of VLSI Design Tools and Technology · Vol. 9, Issue 2, 2019 · pp. 8–12 Read article →