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6 articles for “FASTA Format”
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To Find the Nucleotide and Protein Sequence of AMYLASE in Homo Sapiens in FASTA Format
Abstract: Comprehensive analysis of current enzymes with α-amylase activity (AAMY) belonging to family 13 of glycoside hydrolases (arrangements of 144 archaea, bacteria, and eukaryotes from different species of GH13; 87). Offers. This study aims to deepen our knowledge of the evolutionary molecular relationships between the sequences of the A and B domains, with a particular focus on the correlation between what is observed in structure and the evolution of proteins. A-domain …
Published in Research and Reviews : Journal of Computational Biology · Vol. 10, Issue 3, 2021 · pp. 13–15 Read article
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A Novel WPFM-Transformer Framework for DNA Sequence Classification using FASTA Data
Abstract: The identification of genetic variants, tracing of disease-associated mutations, and the reconstruction of evolutionary relationships from raw sequence data are all achieved by the analysis of DNA sequence. The FASTA format is plain text and is an easy-to-read format, which is why it has endured four decades of the field's growth into bioinformatics. Classical alignment programs like BLAST and Smith-Waterman work well with small data sets, but are limited by …
Published in International Journal of Bioinformatics and Computational Biology · Vol. 4, Issue 2, 2026 Read article
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Insilico Structural Analysis and Homology Modeling of Crustin Protein from Fiddler Crab Species
Abstract: In terms of biomass and ecological or economic importance, the crustacea are the largest, most noticeable, and possibly, the most significance group of marine or aquatic arthropods. Because of their enormous commercial value and the necessity to prevent disease outbreaks in the shellfish aquaculture industry, decapods are the experimental animals of choice for practically all biological studies involving immune responses. Antimicrobial host-defense peptides (AMPs) are major components of metazoan immunity, …
Published in International Journal of Cheminformatics · Vol. 1, Issue 1, 2023 · pp. 1–7 Read article
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Antimicrobial Peptides in Fiddler Crabs: Structural Analysis and Potential Applications
Abstract: Crustaceans represent the largest and most ecologically and economically significant group of marine and aquatic arthropods. Their biomass and critical role in ecosystems highlight their importance. Among crustaceans, decapods are frequently used as model organisms in studies of immune responses due to their significant commercial value and the need to mitigate disease outbreaks in shellfish aquaculture. Antimicrobial host-defense peptides (AMPs) are pivotal in metazoan immunity, especially for invertebrates lacking adaptive …
Published in International Journal of Cheminformatics · Vol. 2, Issue 2, 2024 · pp. 26–32 Read article
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SmartCloud: Extending an AI-Powered Cloud Storage System with Automated S3 Glacier Archiving, SimHash Near-Duplicate Detection, and a Custom-Trained Random Forest Recommendation Engine
Abstract: Cloud storage services have become fundamental infrastructure for both individuals and organizations, yet they continue to charge users for every byte retained without offering any mechanism to automatically reduce that footprint over time. Files accumulate progressively, near-identical document revisions go undetected, and cold data occupies expensive active storage tiers indefinitely. The present work introduces SmartCloud, a fully deployed multi-cloud storage optimization platform that addresses these inefficiencies through four integrated engineering …
Published in Journal of Software Engineering Tools & Technology Trends · Vol. 13, Issue 2, 2026 · pp. 36–44 Read article
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In silico Study on Inhibition of NS5 Protein of Dengue Virus
Abstract: AbstractDengue fever is a flu-like illness. It is caused by a virus. The infection is passed to humans through mosquito bites. Statistical survey has revealed that every year 5,00,000 people get hospitalized due to dengue. Therefore there arises a serious necessity to find a drug molecule to cure this disease. At the first, we identified the proteins involved in the disease for which we obtained FASTA sequence using NCBI. Sequence …
Published in Research & Reviews: A Journal of Bioinformatics · Vol. 4, Issue 2, 2017 · pp. 28–43 Read article