International Journal of Genetic Modifications and Recombinations Review Article

A Systematic Review on Leukemia Detection and Classification Techniques Using Gene Expression

  1. Veerpal Kaur Department of Computer Science and Engineering Punjabi University Patiala
  2. Dr. Jasvir Singh Department of Computer Science and Engineering Punjabi University Patiala
  3. Dr. Neelofar Sohi Department of Computer Science and Engineering Punjabi University Patiala

Abstract

Early diagnosis of genetic diseases is crucial for effective treatment, especially in the case of Leukemia, a type of blood cancer characterized by abnormal proliferation of white blood cells. This paper presents a systematic review of recent computational techniques for the detection and classification of Leukemia using gene expression data obtained from DNA microarray analysis. The study explores diverse methodologies including machine learning (ML), deep learning (DL), and bio-inspired algorithms for identifying Leukemia subtypes such as AML (Acute Myeloid Leukemia) and ALL (Acute Lymphoblastic Leukemia). Several models such as Support Vector Machines, k-Nearest Neighbors, Artificial Neural Networks, Deep Neural Networks, and ensemble learning methods have been discussed for their accuracy and effectiveness in handling high-dimensional microarray datasets. Moreover, feature selection techniques like Genetic Algorithms, Particle Swarm Optimization, and recent hybrid models such as ACO-ALO and SCBAO are reviewed for enhancing classification accuracy. Recent advancements also incorporate entropy-based and multi-class feature extraction to improve performance. While these approaches demonstrate high precision in classification, challenges such as limited datasets, computational cost, and clinical validation remain. The review highlights the potential of hybrid and integrative models for robust and scalable Leukemia diagnosis, emphasizing the need for continued research to bridge computational advancements with clinical applicability.

Keywords

References (16)

  1. Chen W, Lu H, Wang M, Fang C. Gene Expression Data Classification Using Artificial Neural Network Ensembles Based on Samples Filtering. 2009 International Conference on Artificial Intelligence and Computational Intelligence. 2009:626-628. doi:10.1109/aici.2009.441
  2. Kang H, Chen IM, Wilson CS, Bedrick EJ, Harvey RC, Atlas SR, et al. Gene expression classifiers for relapse-free survival and minimal residual disease improve risk classification and outcome prediction in pediatric B-precursor acute lymphoblastic leukemia. Blood. 2010;115(7):1394-1405. doi:10.1182/blood-2009-05-218560
  3. Manoj Kumar, Mohammad Husian, Naveen Upreti and Deepti Gupta, “GENETIC ALGORITHM: REVIEW AND APPLICATION,” International Journal of Information Technology and Knowledge Management, July-December 2010, Volume 2, No. 2, pp. 451-454.
  4. Bhola A, Tiwari AK. Machine Learning Based Approaches for Cancer Classification Using Gene Expression Data. Machine Learning and Applications: An International Journal. 2015;2(3/4):01-12. doi:10.5121/mlaij.2015.2401
  5. Alshamlan H, Badr G, Alohali Y. mRMR-ABC: A Hybrid Gene Selection Algorithm for Cancer Classification Using Microarray Gene Expression Profiling. BioMed Research International. 2015;2015:1-15. doi:10.1155/2015/604910
  6. Shahbeig S, Rahideh A, Helfroush MS, Kazemi K. Gene selection from large-scale gene expression data based on fuzzy interactive multi-objective binary optimization for medical diagnosis. Biocybernetics and Biomedical Engineering. 2018;38(2):313-328. doi:10.1016/j.bbe.2018.02.002
  7. N. Alrefai, “Ensemble Machine Learning for Leukemia Cancer Diagnosis based on Microarray Datasets,” 2019. [Online]. Available: http://www.ripublication.com
  8. Mallick PK, Mohapatra SK, Chae GS, Mohanty MN. Convergent learning–based model for leukemia classification from gene expression. Personal and Ubiquitous Computing. 2020;27(3):1103-1110. doi:10.1007/s00779-020-01467-3
  9. Moser C, Jurinovic V, Sagebiel-Kohler S, Ksienzyk B, Batcha AMN, Dufour A, et al. A clinically applicable gene expression–based score predicts resistance to induction treatment in acute myeloid leukemia. Blood Advances. 2021;5(22):4752-4761. doi:10.1182/bloodadvances.2021004814
  10. Almazrua H, Alshamlan H. A Comprehensive Survey of Recent Hybrid Feature Selection Methods in Cancer Microarray Gene Expression Data. IEEE Access. 2022;10:71427-71449. doi:10.1109/access.2022.3185226
  11. Elaziz MA, Ewees AA, Al-qaness MAA, Abualigah L, Ibrahim RA. Sine–Cosine-Barnacles Algorithm Optimizer with disruption operator for global optimization and automatic data clustering. Expert Systems with Applications. 2022;207:117993. doi:10.1016/j.eswa.2022.117993
  12. AbdElminaam DS, Houssein EH, Said M, Oliva D, Nabil A. An Efficient Heap-Based Optimizer for Parameters Identification of Modified Photovoltaic Models. Ain Shams Engineering Journal. 2022;13(5):101728. doi:10.1016/j.asej.2022.101728
  13. Houssein EH, Abdelminaam DS, Hassan HN, Al-Sayed MM, Nabil E. A Hybrid Barnacles Mating Optimizer Algorithm With Support Vector Machines for Gene Selection of Microarray Cancer Classification. IEEE Access. 2021;9:64895-64905. doi:10.1109/access.2021.3075942
  14. Razzaque A, Badholia DA. PCA based feature extraction and MPSO based feature selection for gene expression microarray medical data classification. Measurement: Sensors. 2024;31:100945. doi:10.1016/j.measen.2023.100945
  15. Selvaraj S, Alsayed AO, Ismail NA, Kavin BP, Onyema EM, Seng GH, et al. Super learner model for classifying leukemia through gene expression monitoring. Discover Oncology. 2024;15(1). doi:10.1007/s12672-024-01337-x
  16. D S, Rajaram G, R E, J V, I G, J R. Enhanced leukemia prediction using hybrid ant colony and ant lion optimization for gene selection and classification. MethodsX. 2025;14:103239. doi:10.1016/j.mex.2025.103239